STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_25442Vacuolar protein sorting-associated protein 4B. (520 aa)    
Predicted Functional Partners:
Fcan01_04557
Charged multivesicular body protein 1b.
   
 0.953
Fcan01_02201
Charged multivesicular body protein 1a.
   
 0.953
Fcan01_13118
Charged multivesicular body protein 5.
   
 0.944
Fcan01_04471
Charged multivesicular body protein 6.
    
 0.716
Fcan01_11982
Charged multivesicular body protein 2a.
    
 0.715
Fcan01_02317
IST1.
   
 0.705
Fcan01_21264
Charged multivesicular body protein 3.
   
 0.615
Fcan01_19491
Charged multivesicular body protein 4b.
    
 0.606
Fcan01_17495
Charged multivesicular body protein 4b.
    
 0.606
Fcan01_04397
Peroxisome biogenesis factor 1.
  
  
  0.605
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.