STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_23427DNA repair protein complementing XP-G cells. (1059 aa)    
Predicted Functional Partners:
Fcan01_05193
DNA excision repair protein ERCC-6.
   
 0.989
Fcan01_18436
DNA excision repair protein haywire.
   
 0.973
Fcan01_05299
TFIIH basal transcription factor complex helicase XPD subunit.
   
 0.962
Fcan01_02641
DNA repair protein complementing XP-A cells.
    
 0.949
Fcan01_05465
Crossover junction endonuclease MUS81.
   
 0.936
Fcan01_05553
Fanconi anemia group M protein.
   
 0.917
Fcan01_13493
General transcription factor IIH subunit.
    
 0.904
Fcan01_02044
DNA excision repair protein ERCC-1.
   
 0.874
Fcan01_12691
DNA repair protein complementing XP-C cells.
   
 
 0.835
Fcan01_09157
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.831
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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