STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_24483t-SNARE domain-containing protein 1. (227 aa)    
Predicted Functional Partners:
Fcan01_07481
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
   
 0.708
Fcan01_09386
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.664
Fcan01_24716
Vesicle-fusing ATPase 1.
   
 0.650
Fcan01_19634
BET1.
   
 0.574
Fcan01_03883
BET1-like protein.
   
 0.574
Fcan01_12552
Syntaxin-10.
    
 0.573
Fcan01_03509
Syntaxin-8.
    
 0.573
Fcan01_26041
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.543
Fcan01_03643
Gamma-soluble NSF attachment protein.
    
 0.536
Fcan01_13090
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.517
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.