STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_23533DNA-binding protein P3A2. (991 aa)    
Predicted Functional Partners:
Fcan01_00644
Pre-mRNA-splicing factor RBM22.
   
 0.562
Fcan01_00774
Pre-mRNA-splicing factor RBM22.
   
 0.562
Fcan01_24766
NAD-dependent protein deacylase sirtuin-5, mitochondrial.
    
 
 0.476
Fcan01_07970
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.476
Fcan01_24765
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
      
 0.454
Fcan01_06224
DNA-binding protein Ets97D.
     
 0.427
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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