STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_21787H/ACA ribonucleoprotein complex subunit 4. (519 aa)    
Predicted Functional Partners:
Fcan01_14515
H/ACA ribonucleoprotein complex subunit 2-like protein.
  
 0.999
Fcan01_04223
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.999
Fcan01_14891
Nucleolar protein 56.
   
 
 0.998
Fcan01_12153
Protein SHQ1.
   
 0.998
Fcan01_08040
Nucleolar protein 58.
  
 
 0.997
Fcan01_05380
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.997
Fcan01_13704
H/ACA ribonucleoprotein complex non-core subunit NAF1.
   
 
 0.989
Fcan01_14744
RNA helicase.
  
 
 0.986
Fcan01_21540
Telomerase Cajal body protein 1.
    
 0.976
Fcan01_03268
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.976
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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