Fcan01_21859 protein (Folsomia candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Fcan01_21859

Uncharacterized protein. (723 aa)

Predicted Functional Partners:

Fcan01_21251

0.561

Fcan01_13999

0.534

Fcan01_23410

0.510

Fcan01_10278

0.488

Fcan01_07898

0.488

Fcan01_07092

0.488

Fcan01_03859

0.488

Fcan01_02375

0.416

Fcan01_25329

0.413

Fcan01_24050

0.413

Your Current Organism:

Folsomia candida

NCBI taxonomy Id: 158441
Other names: F. candida

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fcan01_02375	Fcan01_21859	A0A226F334	A0A226DEC4	Uncharacterized protein.	Uncharacterized protein.	0.416
Fcan01_03859	Fcan01_21251	A0A226F3D9	A0A226DFD6	Heat shock protein 83.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.646
Fcan01_03859	Fcan01_21859	A0A226F3D9	A0A226DEC4	Heat shock protein 83.	Uncharacterized protein.	0.488
Fcan01_03859	Fcan01_23410	A0A226F3D9	A0A226DAS0	Heat shock protein 83.	Caseinolytic peptidase B protein.	0.672
Fcan01_03859	Fcan01_24050	A0A226F3D9	A0A226D9K5	Heat shock protein 83.	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.611
Fcan01_03859	Fcan01_25329	A0A226F3D9	A0A226D2V4	Heat shock protein 83.	78 kDa glucose-regulated protein.	0.611
Fcan01_07092	Fcan01_21251	A0A226EJT7	A0A226DFD6	Heat shock protein 75 kDa, mitochondrial.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.646
Fcan01_07092	Fcan01_21859	A0A226EJT7	A0A226DEC4	Heat shock protein 75 kDa, mitochondrial.	Uncharacterized protein.	0.488
Fcan01_07092	Fcan01_23410	A0A226EJT7	A0A226DAS0	Heat shock protein 75 kDa, mitochondrial.	Caseinolytic peptidase B protein.	0.672
Fcan01_07092	Fcan01_24050	A0A226EJT7	A0A226D9K5	Heat shock protein 75 kDa, mitochondrial.	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.579
Fcan01_07092	Fcan01_25329	A0A226EJT7	A0A226D2V4	Heat shock protein 75 kDa, mitochondrial.	78 kDa glucose-regulated protein.	0.579
Fcan01_07898	Fcan01_21251	A0A226EGH4	A0A226DFD6	Heat shock protein 83.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.646
Fcan01_07898	Fcan01_21859	A0A226EGH4	A0A226DEC4	Heat shock protein 83.	Uncharacterized protein.	0.488
Fcan01_07898	Fcan01_23410	A0A226EGH4	A0A226DAS0	Heat shock protein 83.	Caseinolytic peptidase B protein.	0.672
Fcan01_07898	Fcan01_24050	A0A226EGH4	A0A226D9K5	Heat shock protein 83.	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.625
Fcan01_07898	Fcan01_25329	A0A226EGH4	A0A226D2V4	Heat shock protein 83.	78 kDa glucose-regulated protein.	0.625
Fcan01_10278	Fcan01_21251	A0A226ED54	A0A226DFD6	Hamartin.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.646
Fcan01_10278	Fcan01_21859	A0A226ED54	A0A226DEC4	Hamartin.	Uncharacterized protein.	0.488
Fcan01_10278	Fcan01_23410	A0A226ED54	A0A226DAS0	Hamartin.	Caseinolytic peptidase B protein.	0.672
Fcan01_10278	Fcan01_24050	A0A226ED54	A0A226D9K5	Hamartin.	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.579