STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_22460tRNA wybutosine-synthesizing protein 2. (647 aa)    
Predicted Functional Partners:
Fcan01_21843
tRNA wybutosine-synthesizing protein 5.
 
   
 0.756
Fcan01_12016
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.751
Fcan01_05782
Uncharacterized protein.
   
  
 0.743
Fcan01_05030
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.736
Fcan01_20469
tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4.
   
  
 0.733
Fcan01_05005
tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4.
   
  
 0.733
Fcan01_14097
Pseudouridylate synthase 7.
   
  
 0.730
Fcan01_07890
tRNA methyltransferase 10 A.
   
  
 0.730
Fcan01_03749
Mitochondrial ribonuclease P protein 1.
   
  
 0.730
Fcan01_23474
Elongator complex protein 3.
   
  
 0.704
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.