STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_21555Vacuolar protein sorting-associated protein 72. (1223 aa)    
Predicted Functional Partners:
Fcan01_27602
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.963
Fcan01_27283
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.959
Fcan01_04056
Histone H2A; Belongs to the histone H2A family.
    
 
 0.955
Fcan01_02965
Zinc finger HIT domain-containing protein 1.
    
 
 0.942
Fcan01_09376
Chromatin modification-related protein eaf3.
    
 0.924
Fcan01_11988
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.879
Fcan01_21500
Craniofacial development protein 1.
   
 
 0.840
Fcan01_03990
Bromodomain-containing protein 8.
    
 0.807
Fcan01_15015
Chromatin modification-related protein MEAF6.
    
 0.798
Fcan01_06322
Male-specific lethal 3.
    
 0.746
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.