STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_21681G patch domain-containing protein 4. (350 aa)    
Predicted Functional Partners:
Fcan01_12554
WD repeat-containing protein 46.
   
   0.942
Fcan01_05380
rRNA 2'-O-methyltransferase fibrillarin.
   
   0.929
Fcan01_02856
Bystin.
   
   0.925
Fcan01_03268
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.918
Fcan01_09575
Nucleolar MIF4G domain-containing protein 1.
   
   0.916
Fcan01_19400
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.880
Fcan01_06816
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43.
   
 
 0.872
Fcan01_03795
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 
 0.872
Fcan01_09506
Surfeit locus protein 6.
   
 
 0.836
Fcan01_25449
Eukaryotic initiation factor 4A-III.
   
 
 0.824
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.