STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_20584SID1 transmembrane family member 1. (726 aa)    
Predicted Functional Partners:
Fcan01_26249
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.607
Fcan01_18738
DNA-directed RNA polymerase II subunit RPB11.
    
 0.607
Fcan01_15309
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.607
Fcan01_07984
DNA-directed RNA polymerase II subunit RPB4.
    
 0.607
Fcan01_06220
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
 0.607
Fcan01_02173
DNA-directed RNA polymerase II subunit RPB3.
    
 0.607
Fcan01_07113
Transcription initiation factor IIB.
    
 0.597
Fcan01_02255
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 0.595
Fcan01_18469
FACT complex subunit spt16.
    
 0.588
Fcan01_14296
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 0.585
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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