STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_21298Protein retinal degeneration B. (1254 aa)    
Predicted Functional Partners:
Fcan01_08920
CTD small phosphatase-like protein 2-B.
    
 0.466
Fcan01_02301
CTD small phosphatase-like protein.
    
 0.466
Fcan01_02255
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 0.466
Fcan01_06130
Uncharacterized protein.
   
 
 0.436
Fcan01_09142
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.420
Fcan01_13736
Calpain-7; Belongs to the peptidase C2 family.
 
      0.407
Fcan01_21389
Uncharacterized protein.
     
 0.402
Fcan01_08374
Diacylglycerol kinase.
   
  
 0.401
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.