STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_19670O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. (477 aa)    
Predicted Functional Partners:
Fcan01_12667
Selenide, water dikinase.
     
 0.804
Fcan01_12551
Selenocysteine-specific elongation factor.
      
 0.655
Fcan01_10054
tRNA selenocysteine 1-associated protein 1.
      
 0.655
Fcan01_02976
Serine--tRNA ligase, mitochondrial.
     
 0.614
Fcan01_21115
Protein piccolo.
     
 0.554
Fcan01_08289
tRNA-splicing endonuclease subunit Sen2.
      
 0.552
Fcan01_08451
tRNA-splicing endonuclease subunit Sen34.
      
 0.533
Fcan01_02166
Selenocysteine lyase.
      
 0.529
Fcan01_18456
Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.492
Fcan01_03066
Serine--tRNA ligase.
     
 0.400
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.