STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_18576DUF2236 domain-containing protein. (383 aa)    
Predicted Functional Partners:
Fcan01_18738
DNA-directed RNA polymerase II subunit RPB11.
   
 0.660
Fcan01_26249
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 0.654
Fcan01_06220
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 0.648
Fcan01_02173
DNA-directed RNA polymerase II subunit RPB3.
   
 0.618
Fcan01_15309
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.617
Fcan01_07113
Transcription initiation factor IIB.
   
 0.615
Fcan01_07984
DNA-directed RNA polymerase II subunit RPB4.
   
 0.611
Fcan01_14467
General transcription factor IIE subunit 1.
    
 0.599
Fcan01_13516
Transcription elongation factor SPT4.
   
 0.595
Fcan01_06764
Transcription elongation factor SPT4.
   
 0.595
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.