STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_20264Putative ATP-dependent RNA helicase TDRD12. (570 aa)    
Predicted Functional Partners:
Fcan01_24717
Calcium homeostasis endoplasmic reticulum protein.
   
 0.976
Fcan01_07954
Splicing factor 3B subunit 1.
   
 0.895
Fcan01_13979
Splicing factor 3A subunit 3.
   
 0.886
Fcan01_01752
Small nuclear ribonucleoprotein-associated protein.
    
 0.875
Fcan01_05982
Splicing factor 3B subunit 2.
   
 0.869
Fcan01_11062
Papain inhibitor.
   
 0.861
Fcan01_02188
Splicing factor 3B subunit 3.
   
 0.858
Fcan01_22636
Small nuclear ribonucleoprotein Sm D2.
   
 0.852
Fcan01_07943
Splicing factor 3B subunit 4.
    
 0.842
Fcan01_08132
Uncharacterized protein.
   
 0.838
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.