STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_19616Histidine--tRNA ligase, cytoplasmic. (535 aa)    
Predicted Functional Partners:
Fcan01_15006
Tyrosine--tRNA ligase.
  
 
 0.828
Fcan01_02247
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.785
Fcan01_05838
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.757
Fcan01_02276
Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
  
 
 0.736
Fcan01_04472
Phosphatidylinositol-glycan biosynthesis class X protein.
  
 
 0.729
Fcan01_19751
Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.725
Fcan01_02161
Putative leucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.704
Fcan01_02976
Serine--tRNA ligase, mitochondrial.
  
 
 0.704
Fcan01_20194
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.702
Fcan01_13355
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.702
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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