STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_18442Transposon Tf2-6 polyprotein. (746 aa)    
Predicted Functional Partners:
Fcan01_05553
Fanconi anemia group M protein.
    
 0.601
Fcan01_27865
Transposon Ty3-I Gag-Pol polyprotein.
  
     0.531
Fcan01_25654
Retrovirus-related Pol polyprotein from transposon opus.
  
     0.530
Fcan01_23647
Retrovirus-related Pol polyprotein from transposon opus.
  
     0.526
Fcan01_11902
Transposon Ty3-I Gag-Pol polyprotein.
  
     0.522
Fcan01_23900
Copia protein.
  
  
  0.520
Fcan01_26217
Transposon Ty3-I Gag-Pol polyprotein.
  
     0.518
Fcan01_18414
Copia protein.
  
  
  0.516
Fcan01_25273
Copia protein.
  
  
  0.512
Fcan01_24829
Copia protein.
  
  
  0.512
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.