STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_18710GC-rich sequence DNA-binding factor 2. (929 aa)    
Predicted Functional Partners:
Fcan01_03795
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 0.734
Fcan01_06816
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43.
    
 0.644
Fcan01_07234
Pre-mRNA-splicing factor Syf2.
    
  0.620
Fcan01_23389
Pre-mRNA-processing factor 17.
     
 0.617
Fcan01_03907
Pre-mRNA-processing-splicing factor 8.
    
   0.567
Fcan01_10026
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like.
      
 0.557
Fcan01_15081
Uncharacterized protein.
    
   0.543
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
      
 0.482
Fcan01_14515
H/ACA ribonucleoprotein complex subunit 2-like protein.
    
 
 0.442
Fcan01_02278
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.436
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.