STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_14939Uncharacterized protein. (611 aa)    
Predicted Functional Partners:
Fcan01_05838
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.769
Fcan01_14802
RING-type domain-containing protein.
   
  
 0.562
Fcan01_22460
tRNA wybutosine-synthesizing protein 2.
   
  
 0.557
Fcan01_05030
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.538
Fcan01_21576
tRNA pseudouridine synthase A, mitochondrial.
  
 
 0.495
Fcan01_07890
tRNA methyltransferase 10 A.
   
  
 0.483
Fcan01_02148
Cytochrome b-c1 complex subunit 7.
      
 0.482
Fcan01_09153
WD repeat-containing protein 6.
   
 
 0.464
Fcan01_13069
tRNA (Uracil-5-)-methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.445
Fcan01_03976
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.445
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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