STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_12331Histone lysine demethylase PHF8. (910 aa)    
Predicted Functional Partners:
Fcan01_13219
Histone H3; Belongs to the histone H3 family.
    
 0.771
Fcan01_03832
Histone H3.3.
    
 0.771
Fcan01_02791
Histone H3.3.
    
 0.771
Fcan01_03863
AT-rich interactive domain-containing protein 5B.
     
 0.701
Fcan01_13980
E3 ubiquitin-protein ligase RING2.
   
 
 0.659
Fcan01_12321
Myeloid differentiation primary response protein MyD88.
    
 0.642
Fcan01_12757
Histone-lysine N-methyltransferase SETD1.
   
 0.641
Fcan01_02146
Histone-lysine N-methyltransferase SETD2.
   
 0.620
Fcan01_12565
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.611
Fcan01_08608
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.611
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.