STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_12731RBR-type E3 ubiquitin transferase. (480 aa)    
Predicted Functional Partners:
Fcan01_12336
Mitoferrin-2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.685
Fcan01_07087
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.564
Fcan01_03789
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.564
Fcan01_06909
AN1-type zinc finger protein 4.
   
 0.557
Fcan01_22866
Uncharacterized protein.
    
  0.554
Fcan01_18153
Ubiquitin-like domain-containing protein.
    
  0.554
Fcan01_01901
Translation initiation factor eIF-2B subunit epsilon.
 
 
    0.549
Fcan01_22756
Ubiquitin.
   
 0.499
Fcan01_08796
Uncharacterized protein.
   
 0.499
Fcan01_02744
Polyubiquitin.
   
 0.499
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.