STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_12818LIM/homeobox protein Lhx5. (395 aa)    
Predicted Functional Partners:
Fcan01_22637
Cyclin-K; Belongs to the cyclin family.
    
   0.897
Fcan01_06492
Cyclin-T1; Belongs to the cyclin family.
    
   0.796
Fcan01_12437
Forkhead box protein L2.
   
 
 0.496
Fcan01_21640
Homeotic protein distal-less.
  
  
 0.475
Fcan01_19773
Single-stranded DNA-binding protein 4.
    
 
 0.470
Fcan01_27109
POU domain protein.
   
 
 0.456
Fcan01_14062
Paired box pox-neuro protein.
   
 
 0.416
Fcan01_04536
Paired box protein Pax-5.
   
 
 0.416
Fcan01_08254
Transcription factor GATA-4.
    
 0.403
Fcan01_08255
GATA-binding factor A.
    
 0.403
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.