STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_11543Putative calcium-binding protein CML20. (158 aa)    
Predicted Functional Partners:
Fcan01_12691
DNA repair protein complementing XP-C cells.
    
 0.930
Fcan01_03927
Transcription and mRNA export factor ENY2.
   
 
 0.880
Fcan01_12518
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.849
Fcan01_07024
PCI domain-containing protein 2.
    
 
 0.768
Fcan01_04627
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.751
Fcan01_04628
Peripheral plasma membrane protein CASK.
    
 0.751
Fcan01_21559
Germinal-center associated nuclear protein.
    
 
 0.746
Fcan01_12297
Germinal-center associated nuclear protein.
    
 
 0.746
Fcan01_01328
Intraflagellar transport protein 88.
    
 0.670
Fcan01_04646
Cullin-4A; Belongs to the cullin family.
     
 0.627
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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