STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_08912Lecithin retinol acyltransferase. (240 aa)    
Predicted Functional Partners:
Fcan01_22409
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
  0.900
Fcan01_19046
Retinol dehydrogenase 12.
     
  0.900
Fcan01_18708
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
  0.900
Fcan01_16573
Retinol dehydrogenase 12.
     
  0.900
Fcan01_15458
Retinol dehydrogenase 14.
     
  0.900
Fcan01_13113
Epidermal retinol dehydrogenase 2.
     
  0.900
Fcan01_13602
Retinol dehydrogenase 11.
     
  0.900
Fcan01_13125
Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
  0.900
Fcan01_11039
Retinol dehydrogenase 12.
     
  0.900
Fcan01_09051
Retinol dehydrogenase 11.
     
  0.900
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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