STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_07552Pre-mRNA-splicing factor SYF1. (866 aa)    
Predicted Functional Partners:
Fcan01_12883
Crooked neck-like protein 1.
   
0.999
Fcan01_07234
Pre-mRNA-splicing factor Syf2.
    
 0.999
Fcan01_05226
SNW domain-containing protein 1.
   
 0.999
Fcan01_02955
Pre-mRNA-processing factor 19.
   
 0.999
Fcan01_05690
Intron-binding protein aquarius.
   
 0.998
Fcan01_07081
Cell division cycle 5-like protein.
   
 
 0.993
Fcan01_23389
Pre-mRNA-processing factor 17.
    
 
 0.992
Fcan01_07793
Tr-type G domain-containing protein.
   
 
 0.992
Fcan01_05982
Splicing factor 3B subunit 2.
   
 
 0.992
Fcan01_26225
Putative U2 small nuclear ribonucleoprotein A.
   
 
 0.991
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.