STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_07504Ubiquitinyl hydrolase 1. (720 aa)    
Predicted Functional Partners:
Fcan01_06917
Uncharacterized protein.
    
 0.744
Fcan01_02744
Polyubiquitin.
    
 0.658
Fcan01_15006
Tyrosine--tRNA ligase.
      
 0.657
Fcan01_24811
Replication factor C subunit 5.
    
 0.627
Fcan01_11946
TNF receptor-associated factor 6.
    
 0.616
Fcan01_03684
Protein VAC14.
      
 0.616
Fcan01_21810
STAM-binding protein-like A.
   
 
 0.575
Fcan01_23529
E3 ubiquitin-protein ligase RKP.
   
 0.570
Fcan01_14745
Uncharacterized protein.
   
 
 0.558
Fcan01_21364
Uncharacterized protein.
   
 
 0.549
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.