STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_07802BRCA1-associated RING domain protein 1. (793 aa)    
Predicted Functional Partners:
Fcan01_13444
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.998
Fcan01_03128
Non-specific serine/threonine protein kinase.
    
 0.983
Fcan01_10031
DNA topoisomerase 2-binding protein 1-A.
   
 0.965
Fcan01_04574
Nibrin.
    
 0.954
Fcan01_04533
Zinc finger MIZ domain-containing protein 1.
    
 0.937
Fcan01_19698
Ubiquitin carboxyl-terminal hydrolase.
    
 0.934
Fcan01_08083
Ubiquitin carboxyl-terminal hydrolase.
    
 0.934
Fcan01_12819
PAX-interacting protein 1.
   
 0.906
Fcan01_14305
Serine/threonine-protein kinase atr.
   
 0.862
Fcan01_12092
Regulator of telomere elongation helicase 1.
   
 0.849
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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