STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_05438Spermatogenesis-defective protein 39. (449 aa)    
Predicted Functional Partners:
Fcan01_02359
Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.942
Fcan01_12801
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.862
Fcan01_26041
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
   
  
 0.703
Fcan01_08335
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.577
Fcan01_18685
Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.
   
  
 0.554
Fcan01_14721
Conserved oligomeric Golgi complex subunit 7.
     
 0.544
Fcan01_01925
Vacuolar protein sorting-associated protein 8.
   
  
 0.536
Fcan01_06252
Transforming growth factor-beta receptor-associated protein 1.
   
 
 0.535
Fcan01_04564
Conserved oligomeric Golgi complex subunit 3.
   
 
 0.419
Fcan01_01879
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 
 0.417
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.