STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_04280Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (293 aa)    
Predicted Functional Partners:
Fcan01_13925
Protoheme IX farnesyltransferase, mitochondrial.
   
 
 0.969
Fcan01_19659
Cytochrome c oxidase assembly protein COX15.
 
  
 
 0.920
Fcan01_03987
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.919
Fcan01_02602
Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.
     
 0.901
Fcan01_21878
Cytochrome c1, heme protein, mitochondrial.
   
 
 0.733
Fcan01_07970
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.693
Fcan01_03673
Uncharacterized protein.
   
  
 0.639
Fcan01_05727
RNA exonuclease 4.
      
 0.597
Fcan01_21218
Rho GTPase-activating protein 6.
      
 0.557
Fcan01_03483
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial.
   
  
 0.557
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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