STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_05331E3 ubiquitin-protein ligase RNF8. (761 aa)    
Predicted Functional Partners:
Fcan01_21207
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.680
Fcan01_02744
Polyubiquitin.
   
 0.581
Fcan01_12819
PAX-interacting protein 1.
    
 0.542
Fcan01_02898
Mediator of DNA damage checkpoint protein 1.
    
 0.495
Fcan01_22563
Transket_pyr domain-containing protein.
    
 
 0.486
Fcan01_06238
2-oxoglutarate dehydrogenase, mitochondrial.
    
 
 0.486
Fcan01_07802
BRCA1-associated RING domain protein 1.
   
 0.475
Fcan01_22866
Uncharacterized protein.
    
  0.456
Fcan01_18153
Ubiquitin-like domain-containing protein.
    
  0.456
Fcan01_06909
AN1-type zinc finger protein 4.
   
 0.440
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.