STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_05249Tight junction-associated protein 1. (571 aa)    
Predicted Functional Partners:
Fcan01_27602
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.750
Fcan01_15015
Chromatin modification-related protein MEAF6.
    
 0.727
Fcan01_09836
Transcriptional adapter 3.
    
 0.723
Fcan01_11988
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.722
Fcan01_21555
Vacuolar protein sorting-associated protein 72.
    
 0.706
Fcan01_02173
DNA-directed RNA polymerase II subunit RPB3.
   
 0.702
Fcan01_27283
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.694
Fcan01_18738
DNA-directed RNA polymerase II subunit RPB11.
   
 0.690
Fcan01_02607
RNA polymerase II elongation factor ELL2.
    
 0.685
Fcan01_18747
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
   
 0.654
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.