STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_05782Uncharacterized protein. (1083 aa)    
Predicted Functional Partners:
Fcan01_05030
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
 0.998
Fcan01_03896
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
  
 0.922
Fcan01_15147
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
    0.880
Fcan01_03796
Putative ATP-dependent RNA helicase DDX56.
   
   0.842
Fcan01_14744
RNA helicase.
   
   0.829
Fcan01_26674
Putative RNA-binding protein 19.
   
    0.816
Fcan01_09163
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3/UBA4 homolog. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as subst [...]
   
  
 0.816
Fcan01_14815
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
  
 0.776
Fcan01_05096
RNA-binding protein 34.
   
   0.770
Fcan01_22460
tRNA wybutosine-synthesizing protein 2.
   
  
 0.743
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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