STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_04643RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (381 aa)    
Predicted Functional Partners:
Fcan01_02367
Serine/threonine-protein kinase RIO2.
   
 0.999
Fcan01_02856
Bystin.
   
 0.999
Fcan01_02978
Protein LTV1.
   
 0.999
Fcan01_03828
Pre-rRNA-processing protein TSR1.
   
 0.999
Fcan01_18458
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 0.994
Fcan01_05291
U3 small nucleolar ribonucleoprotein IMP3.
   
 0.989
Fcan01_15193
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 0.987
Fcan01_13873
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.984
Fcan01_02510
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.982
Fcan01_12918
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.981
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.