Fcan01_00494 protein (Folsomia candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Fcan01_00494

E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (269 aa)

Predicted Functional Partners:

Fcan01_13742

0.904

Fcan01_08056

0.904

Fcan01_26716

0.690

Fcan01_04546

0.690

Fcan01_15319

0.530

Fcan01_05208

0.513

Fcan01_02085

0.458

Your Current Organism:

Folsomia candida

NCBI taxonomy Id: 158441
Other names: F. candida

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fcan01_00494	Fcan01_02085	A0A226EWM7	A0A226EZT8	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	E3 ubiquitin-protein ligase Siah2.	0.458
Fcan01_00494	Fcan01_04546	A0A226EWM7	A0A226ERD5	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	0.690
Fcan01_00494	Fcan01_05208	A0A226EWM7	A0A226EV06	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	E3 ubiquitin-protein ligase Siah1.	0.513
Fcan01_00494	Fcan01_08056	A0A226EWM7	A0A226EMI6	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Armadillo segment polarity protein.	0.904
Fcan01_00494	Fcan01_13742	A0A226EWM7	A0A226E5C7	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	F-box-like/WD repeat-containing protein TBL1X.	0.904
Fcan01_00494	Fcan01_15319	A0A226EWM7	A0A226DY24	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Putative E3 ubiquitin-protein ligase SINA-like 9.	0.530
Fcan01_00494	Fcan01_26716	A0A226EWM7	A0A226D0C9	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	0.690
Fcan01_02085	Fcan01_00494	A0A226EZT8	A0A226EWM7	E3 ubiquitin-protein ligase Siah2.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.458
Fcan01_02085	Fcan01_04546	A0A226EZT8	A0A226ERD5	E3 ubiquitin-protein ligase Siah2.	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	0.716
Fcan01_02085	Fcan01_05208	A0A226EZT8	A0A226EV06	E3 ubiquitin-protein ligase Siah2.	E3 ubiquitin-protein ligase Siah1.	0.492
Fcan01_02085	Fcan01_08056	A0A226EZT8	A0A226EMI6	E3 ubiquitin-protein ligase Siah2.	Armadillo segment polarity protein.	0.919
Fcan01_02085	Fcan01_13742	A0A226EZT8	A0A226E5C7	E3 ubiquitin-protein ligase Siah2.	F-box-like/WD repeat-containing protein TBL1X.	0.910
Fcan01_02085	Fcan01_15319	A0A226EZT8	A0A226DY24	E3 ubiquitin-protein ligase Siah2.	Putative E3 ubiquitin-protein ligase SINA-like 9.	0.518
Fcan01_02085	Fcan01_26716	A0A226EZT8	A0A226D0C9	E3 ubiquitin-protein ligase Siah2.	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	0.716
Fcan01_04546	Fcan01_00494	A0A226ERD5	A0A226EWM7	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.690
Fcan01_04546	Fcan01_02085	A0A226ERD5	A0A226EZT8	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	E3 ubiquitin-protein ligase Siah2.	0.716
Fcan01_04546	Fcan01_15319	A0A226ERD5	A0A226DY24	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	Putative E3 ubiquitin-protein ligase SINA-like 9.	0.690
Fcan01_04546	Fcan01_26716	A0A226ERD5	A0A226D0C9	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	0.901
Fcan01_05208	Fcan01_00494	A0A226EV06	A0A226EWM7	E3 ubiquitin-protein ligase Siah1.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.513
Fcan01_05208	Fcan01_02085	A0A226EV06	A0A226EZT8	E3 ubiquitin-protein ligase Siah1.	E3 ubiquitin-protein ligase Siah2.	0.492

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About