STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_02538Sorting nexin-27. (506 aa)    
Predicted Functional Partners:
Fcan01_27991
Vacuolar protein sorting-associated protein 26B.
   
 
 0.908
Fcan01_28450
Von Willebrand factor A domain-containing protein 8.
   
 
 0.727
Fcan01_26763
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.716
Fcan01_02624
Sorting nexin-2.
   
 
 0.671
Fcan01_22497
Sorting nexin-6.
    
 
 0.669
Fcan01_12813
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.669
Fcan01_07512
Sorting nexin-12.
    
 
 0.667
Fcan01_06275
WASH complex subunit FAM21C.
    
 
 0.563
Fcan01_26281
Sorting nexin-13.
   
  
 0.548
Fcan01_12357
Nucleoside diphosphate kinase.
 
      0.517
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.