Fcan01_02656 protein (Folsomia candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Fcan01_02656

Ribose-5-phosphate isomerase. (305 aa)

Predicted Functional Partners:

Fcan01_12308

0.993

Fcan01_07762

0.989

Fcan01_13227

0.969

Fcan01_01788

0.956

Fcan01_12624

0.950

Fcan01_12445

0.948

Fcan01_15926

0.946

Fcan01_12605

0.941

Fcan01_10808

0.941

Fcan01_13593

0.875

Your Current Organism:

Folsomia candida

NCBI taxonomy Id: 158441
Other names: F. candida

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fcan01_01788	Fcan01_02656	A0A226EXY0	A0A226EXG0	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Ribose-5-phosphate isomerase.	0.956
Fcan01_01788	Fcan01_07762	A0A226EXY0	A0A226EI13	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	0.461
Fcan01_01788	Fcan01_10808	A0A226EXY0	A0A226E918	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Ribose-phosphate pyrophosphokinase 2.	0.941
Fcan01_01788	Fcan01_12308	A0A226EXY0	A0A226E538	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Transketolase.	0.966
Fcan01_01788	Fcan01_12445	A0A226EXY0	A0A226E6C3	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Transaldolase.	0.727
Fcan01_01788	Fcan01_12605	A0A226EXY0	A0A226E751	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Ribose-phosphate pyrophosphokinase 1.	0.941
Fcan01_01788	Fcan01_12624	A0A226EXY0	A0A226E8V9	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Phosphoglucomutase-2.	0.946
Fcan01_01788	Fcan01_13227	A0A226EXY0	A0A226E1K7	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Phosphoglucomutase-1; Belongs to the phosphohexose mutase family.	0.944
Fcan01_01788	Fcan01_13593	A0A226EXY0	A0A226E486	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	RNA-binding protein 45.	0.461
Fcan01_01788	Fcan01_15926	A0A226EXY0	A0A226DXW6	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Ribulose-phosphate 3-epimerase.	0.599
Fcan01_02656	Fcan01_01788	A0A226EXG0	A0A226EXY0	Ribose-5-phosphate isomerase.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.956
Fcan01_02656	Fcan01_07762	A0A226EXG0	A0A226EI13	Ribose-5-phosphate isomerase.	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	0.989
Fcan01_02656	Fcan01_10808	A0A226EXG0	A0A226E918	Ribose-5-phosphate isomerase.	Ribose-phosphate pyrophosphokinase 2.	0.941
Fcan01_02656	Fcan01_12308	A0A226EXG0	A0A226E538	Ribose-5-phosphate isomerase.	Transketolase.	0.993
Fcan01_02656	Fcan01_12445	A0A226EXG0	A0A226E6C3	Ribose-5-phosphate isomerase.	Transaldolase.	0.948
Fcan01_02656	Fcan01_12605	A0A226EXG0	A0A226E751	Ribose-5-phosphate isomerase.	Ribose-phosphate pyrophosphokinase 1.	0.941
Fcan01_02656	Fcan01_12624	A0A226EXG0	A0A226E8V9	Ribose-5-phosphate isomerase.	Phosphoglucomutase-2.	0.950
Fcan01_02656	Fcan01_13227	A0A226EXG0	A0A226E1K7	Ribose-5-phosphate isomerase.	Phosphoglucomutase-1; Belongs to the phosphohexose mutase family.	0.969
Fcan01_02656	Fcan01_13593	A0A226EXG0	A0A226E486	Ribose-5-phosphate isomerase.	RNA-binding protein 45.	0.875
Fcan01_02656	Fcan01_15926	A0A226EXG0	A0A226DXW6	Ribose-5-phosphate isomerase.	Ribulose-phosphate 3-epimerase.	0.946