STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_01883Putative cystathionine gamma-lyase 2. (398 aa)    
Predicted Functional Partners:
Fcan01_05009
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.971
Fcan01_09427
Cystathionine beta-synthase.
  
 0.969
Fcan01_05006
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.969
Fcan01_21078
Cysteine synthase.
 
 0.968
Fcan01_13748
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.964
Fcan01_12530
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.933
Fcan01_01918
Homocysteine S-methyltransferase.
  
 
 0.931
Fcan01_13096
Kynurenine--oxoglutarate transaminase 3.
  
 
 0.930
Fcan01_13098
Kynurenine--oxoglutarate transaminase 3.
  
 
 0.930
Fcan01_13407
Kynurenine--oxoglutarate transaminase 1, mitochondrial.
  
 
 0.930
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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