STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_03344Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. (1246 aa)    
Predicted Functional Partners:
Fcan01_06220
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
  0.538
Fcan01_06108
Negative elongation factor B.
    
 0.522
Fcan01_06055
Negative elongation factor B.
    
 0.522
Fcan01_07398
Propionyl-CoA carboxylase alpha chain, mitochondrial.
    
 0.478
Fcan01_04334
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
    
 0.478
Fcan01_02173
DNA-directed RNA polymerase II subunit RPB3.
    
  0.465
Fcan01_15309
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.463
Fcan01_26249
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.460
Fcan01_18738
DNA-directed RNA polymerase II subunit RPB11.
    
  0.460
Fcan01_07984
DNA-directed RNA polymerase II subunit RPB4.
    
  0.456
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.