STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_04013TBC1 domain family member 5. (395 aa)    
Predicted Functional Partners:
Fcan01_13409
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
 
      0.735
Fcan01_12763
Ras-related protein Rab-35.
     
 0.727
Fcan01_04045
Carabin.
      
 0.603
Fcan01_05048
Intraflagellar transport protein 27.
     
 0.588
Fcan01_12411
Rab GTPase-activating protein 1-like.
      
 0.529
Fcan01_28031
TLDc domain-containing protein.
      
 0.517
Fcan01_05232
Ecotropic viral integration site 5.
     
 0.477
Fcan01_04216
LIM/homeobox protein Awh.
 
      0.471
Fcan01_23516
NACHT and WD repeat domain-containing protein 2.
 
      0.453
Fcan01_21047
NCK-interacting protein with SH3 domain.
   
    0.434
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.