STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_00221Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (316 aa)    
Predicted Functional Partners:
Fcan01_19722
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.920
Fcan01_18544
Serine/threonine-protein kinase RIO3.
     
  0.900
Fcan01_25721
Squalene synthase.
  
 0.758
Fcan01_20051
Botryococcus squalene synthase.
  
 0.758
Fcan01_10533
Botryococcene synthase.
  
 0.757
Fcan01_26607
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.737
Fcan01_10828
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.737
Fcan01_10829
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.737
Fcan01_09958
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.737
Fcan01_15789
Farnesyl pyrophosphate synthase.
    
 0.733
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.