STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_03536Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (791 aa)    
Predicted Functional Partners:
Fcan01_13171
Protein transport protein Sec24C.
   
 0.999
Fcan01_11917
Protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.998
Fcan01_04392
Protein transport protein Sec31A.
   
 0.997
Fcan01_04506
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.990
Fcan01_08061
Protein transport protein Sec16A.
   
 0.977
Fcan01_15301
Uncharacterized protein.
   
 0.958
Fcan01_13721
Uncharacterized protein.
   
 0.957
Fcan01_13090
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.914
Fcan01_07481
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
   
 
 0.908
Fcan01_01856
Syntaxin-5; Belongs to the syntaxin family.
    
 0.908
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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