STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_02796Protein prenyltransferase alpha subunit repeat-containing protein 1. (441 aa)    
Predicted Functional Partners:
Fcan01_08088
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.948
Fcan01_03621
Ras-related protein Rab-5B.
    
 0.713
Fcan01_23476
Ras-related protein Rab-39B.
    
 0.660
Fcan01_18619
Ras-related protein Rab-36.
    
 0.642
Fcan01_07481
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 
 0.563
Fcan01_05770
Ras-related protein Rab-18-B.
    
 0.544
Fcan01_27138
Ras-related protein Rab-30.
    
  0.522
Fcan01_07120
Ras-related protein Rab-14.
    
 0.518
Fcan01_09700
Ras-related protein Rab-11B.
    
 0.497
Fcan01_12635
Rab-like protein 2A.
    
 0.494
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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