Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
ufsp2UFM1 specific peptidase 2. (472 aa)    
Predicted Functional Partners:
ufm1
Ubiquitin fold modifier 1.
    
 
 0.979
odr4
Odr-4 GPCR localization factor homolog.
   
 
 0.956
ufc1
Ubiquitin-fold modifier conjugating enzyme 1.
  
  
 0.819
uba5
Ubiquitin like modifier activating enzyme 5.
  
  
 0.815
ddrgk1
DDRGK domain containing 1.
    
 
 0.764
ufl1
UFM1 specific ligase 1.
   
  
 0.761
cdk5rap3
CDK5 regulatory subunit associated protein 3.
   
  
 0.745
sgsm3
Small G protein signaling modulator 3.
      
 0.692
ccdc86
Coiled-coil domain containing 86.
      
 0.687
nubpl
Nucleotide binding protein like.
      
 0.645
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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