STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859586Leucine-rich repeat LGI family member 2-like. (555 aa)    
Predicted Functional Partners:
LOC114859867
Disintegrin and metalloproteinase domain-containing protein 11-like.
    
 0.829
LOC114845511
Disintegrin and metalloproteinase domain-containing protein 11-like.
    
 0.829
adam22
ADAM metallopeptidase domain 22.
    
 0.829
adam23
ADAM metallopeptidase domain 23.
    
 0.829
adam9
ADAM metallopeptidase domain 9.
    
 0.580
LOC114870623
Disintegrin and metalloproteinase domain-containing protein 33-like.
    
 0.580
LOC114862803
Zinc metalloproteinase-disintegrin-like brevilysin H2a.
    
 0.580
adam19
ADAM metallopeptidase domain 19.
    
 0.580
LOC114846034
Disintegrin and metalloproteinase domain-containing protein 9-like.
    
 0.580
adam8
ADAM metallopeptidase domain 8.
    
 0.580
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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