STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbckTBC1 domain containing kinase. (891 aa)    
Predicted Functional Partners:
LOC114857318
Protein C12orf4 homolog.
    
 
 0.629
LOC114857056
Protein C12orf4 homolog.
    
 
 0.629
ppp1r21
Protein phosphatase 1 regulatory subunit 21.
    
 
 0.583
LOC114842639
Interleukin-6 receptor subunit alpha-like.
    
   0.573
nol10
Nucleolar protein 10.
     
 0.527
nme6
NME/NM23 nucleoside diphosphate kinase 6.
   
  
 0.522
LOC114856050
Protein canopy homolog 2-like.
      
 0.470
LOC114853390
MOB kinase activator 3C-like.
      
 0.404
LOC114853216
MOB kinase activator 3A.
      
 0.404
LOC114862229
MOB kinase activator 1A.
      
 0.403
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.