STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858972Lens fiber major intrinsic protein-like. (263 aa)    
Predicted Functional Partners:
katnal2
Katanin catalytic subunit A1 like 2.
  
 0.749
katna1
Katanin catalytic subunit A1.
  
 0.727
LOC114846858
Katanin p60 ATPase-containing subunit A-like 1.
  
 0.727
gk
Glycerol kinase.
  
 0.706
psmc5
Proteasome 26S subunit, ATPase 5.
  
 0.706
atad2b
ATPase family AAA domain containing 2B.
  
 0.706
psmc2
Proteasome 26S subunit, ATPase 2.
  
 0.706
fggy
FGGY carbohydrate kinase domain containing.
  
 0.706
shpk
Sedoheptulokinase.
  
 0.706
gk5
Glycerol kinase 5.
  
 0.706
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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