STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ufsp1UFM1 specific peptidase 1 (inactive). (243 aa)    
Predicted Functional Partners:
ufm1
Ubiquitin fold modifier 1.
  
 
 
 0.961
ufc1
Ubiquitin-fold modifier conjugating enzyme 1.
  
  
 0.715
uba5
Ubiquitin like modifier activating enzyme 5.
  
   
 0.661
odr4
Odr-4 GPCR localization factor homolog.
   
 
 0.606
ddrgk1
DDRGK domain containing 1.
    
 
 0.520
ufl1
UFM1 specific ligase 1.
   
  
 0.479
cdk5rap3
CDK5 regulatory subunit associated protein 3.
   
  
 0.402
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.