Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000001003annotation not available (66 aa)    
Predicted Functional Partners:
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
    
 
 0.643
wdr90
WD repeat domain 90.
    
 
 0.570
LOC114870611
Peripheral plasma membrane protein CASK-like.
   
  0.507
cask
Calcium/calmodulin dependent serine protein kinase.
   
  0.507
calm3
Calmodulin 3.
    
 0.478
LOC114849035
Calmodulin.
    
 0.478
calm2
Calmodulin 2.
    
 0.478
LOC114849214
Calmodulin.
    
 0.478
LOC114854168
Radial spoke head protein 6 homolog A-like.
   
   0.476
pacrg
Parkin coregulated.
   
 
 0.453
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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