Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cip2aCell proliferation regulating inhibitor of protein phosphatase 2A. (916 aa)    
Predicted Functional Partners:
kif11
Kinesin family member 11.
   
 
 0.835
LOC114867941
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 0.810
topbp1
DNA topoisomerase II binding protein 1.
   
 
 0.807
cdc23
Cell division cycle 23.
    
   0.796
pacrg
Parkin coregulated.
    
 
 0.775
brca1
BRCA1 DNA repair associated.
   
 0.771
espl1
Extra spindle pole bodies like 1, separase.
    
 0.738
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.717
ncapg
non-SMC condensin I complex subunit G.
   
   0.717
LOC114853533
Early nodulin-75-like.
     
 0.713
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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