Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114852179Proteolipid protein 2-like. (147 aa)    
Predicted Functional Partners:
cmtm4
CKLF like MARVEL transmembrane domain containing 4.
      
 0.847
cmtm7
CKLF like MARVEL transmembrane domain containing 7.
      
 0.831
LOC114852178
CKLF-like MARVEL transmembrane domain-containing protein 3.
      
 0.819
cmtm6
CKLF like MARVEL transmembrane domain containing 6.
      
 0.804
cmtm8
CKLF like MARVEL transmembrane domain containing 8.
      
 0.782
fam3a
FAM3 metabolism regulating signaling molecule A.
      
 0.729
PLLP
Plasmolipin.
      
 0.709
CYTL1
Cytokine like 1.
      
 0.648
mal2
Mal, T cell differentiation protein 2.
      
 0.647
ackr3
Atypical chemokine receptor 3.
      
 0.624
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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