Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM184CTransmembrane protein 184C-like. (478 aa)    
Predicted Functional Partners:
fam204a
Family with sequence similarity 204 member A.
      
 0.615
prmt9
Protein arginine methyltransferase 9.
      
 0.511
SLC35A4
Solute carrier family 35 member A4.
   
  
 0.507
LOC114863875
Matrin-3-like.
    
   0.468
ednra
Endothelin receptor type A.
      
 0.457
arhgap10
Rho GTPase activating protein 10.
      
 0.448
pnisr
PNN interacting serine and arginine rich protein.
      
 0.445
slc35f6
Solute carrier family 35 member F6.
      
 0.423
pyroxd1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
      
 0.412
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.410
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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